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Expression Atlas Search Suggestions

gxa/gene-suggestions

Search-term completions from EMBL-EBI Expression Atlas for a text and one species (for example brca in homo sapiens, pax6 in danio rerio): gene symbols, synonyms, HGNC symbols, Ensembl gene ids, Gene Ontology, InterPro and pathway terms that start with or contain the text, each with its category. Returns an empty list when nothing matches. Expression Atlas data, CC BY 4.0, served by Eden Engine; not an official Expression Atlas product.

activeper callv1

Price

$0.0026 per call

You pay the price shown. If a call turns out to cost more than its quote, you pay the actual price, capped at twice the quote. No monthly minimum. Top-ups start at $0.50.

Data source

Expression Atlas (EMBL-EBI)

Data from Expression Atlas, EMBL-EBI (https://www.ebi.ac.uk/gxa), licensed under CC BY 4.0 (https://creativecommons.org/licenses/by/4.0/). Served by Eden Engine; not an official Expression Atlas or EMBL-EBI product.

Use it

Five steps: search, inspect, learn, run, settle. No per-tool setup; your agent reaches this tool through the meta-tools it already has.

Connect once and your AI can find and run this tool, and any other it needs.

Install itCreate an account
agent
// 1. search: find the tool
omnial_search({ query: "what you need" })

// 2. inspect: price and input schema
omnial_inspect({ tool: "gxa/gene-suggestions" })

// 3. learn: read the usage guide at runtime
omnial_learn({ tool: "gxa/gene-suggestions" })

// 4. run: price the exact call first, then run it
omnial_execute({ tool: "gxa/gene-suggestions", input: { /* see input_schema */ }, dry_run: true })
omnial_execute({ tool: "gxa/gene-suggestions", input: { /* ... */ } })

// 5. settle: the call is charged when it finishes, nothing to do

Not connected yet? Point your MCP client at https://mcp.eden-engine.com/mcp, then copy a config for your client.

Pricing

Every charge this tool can incur.

ChargePrice
Per call
$0.0026
Updated
Oct 25, 2026

Input and output schemas

Input schema
input_schema.json
{
  "type": "object",
  "required": [
    "query",
    "species"
  ],
  "properties": {
    "query": {
      "type": "string",
      "pattern": "^[A-Za-z0-9 ._:/-]+$",
      "maxLength": 60,
      "minLength": 2,
      "description": "Text to complete, two or more characters, for example brca, glucose or FBgn."
    },
    "species": {
      "type": "string",
      "pattern": "^[a-z]+( [a-z]+){1,2}$",
      "description": "Species in lower case as the Atlas names it, for example homo sapiens, mus musculus, danio rerio, drosophila melanogaster, arabidopsis thaliana. An unknown species returns an empty list."
    }
  },
  "additionalProperties": false
}
Output schema
output_schema.json
{
  "type": "object",
  "required": [
    "results"
  ],
  "properties": {
    "results": {
      "type": "array",
      "items": {
        "type": "object",
        "required": [
          "term",
          "category"
        ],
        "properties": {
          "term": {
            "type": "string",
            "description": "Suggested search term."
          },
          "category": {
            "type": "string",
            "description": "What the term is: symbol, synonym, hgnc_symbol, ensgene, goterm, interproterm, pathwayname and others."
          }
        },
        "additionalProperties": true
      }
    }
  },
  "description": "The suggestions, wrapped as `results`; empty when nothing matches.",
  "additionalProperties": true
}