MGnify Study Lookup: One Metagenomics Study by MGYS Accession

mgnify/study-lookup

Returns one MGnify study by MGYS accession as a JSON:API record: name, abstract, BioProject and secondary accession, centre, sample count, release and update dates, and relationship links to its samples, biomes, analyses and publications. EMBL-EBI MGnify data, served by Eden Engine; not an official EMBL-EBI product.

activeper callv1

Price

$0.0026 per call

You pay the price shown. If a call turns out to cost more than its quote, you pay the actual price, capped at twice the quote. No monthly minimum. Top-ups start at $0.50.

Data source

EMBL-EBI

Data from MGnify, EMBL-EBI (ebi.ac.uk). EMBL-EBI places no additional restrictions on use or redistribution of its data beyond those set by the original data owners and expects attribution (ebi.ac.uk/about/terms-of-use). Served by Eden Engine; not an official EMBL-EBI product.

Use it

Five steps: search, inspect, learn, run, settle. No per-tool setup; your agent reaches this tool through the meta-tools it already has.

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agent

// 1. search: find the tool
omnial_search({ query: "what you need" })

// 2. inspect: price and input schema
omnial_inspect({ tool: "mgnify/study-lookup" })

// 3. learn: read the usage guide at runtime
omnial_learn({ tool: "mgnify/study-lookup" })

// 4. run: price the exact call first, then run it
omnial_execute({ tool: "mgnify/study-lookup", input: { /* see input_schema */ }, dry_run: true })
omnial_execute({ tool: "mgnify/study-lookup", input: { /* ... */ } })

// 5. settle: the call is charged when it finishes, nothing to do

Not connected yet? Point your MCP client at https://mcp.eden-engine.com/mcp, then copy a config for your client.

Pricing

Every charge this tool can incur.

Charge	Price
Per call	$0.0026

Updated: Oct 25, 2026

Input and output schemas

Input schema

input_schema.json

{
  "type": "object",
  "required": [
    "accession"
  ],
  "properties": {
    "accession": {
      "type": "string",
      "pattern": "^MGYS[0-9]{8}$",
      "description": "MGnify study accession, MGYS followed by eight digits, for example MGYS00000410."
    }
  },
  "additionalProperties": false
}

Output schema

output_schema.json

{
  "type": "object",
  "required": [
    "data"
  ],
  "properties": {
    "data": {
      "type": "object",
      "required": [
        "id"
      ],
      "properties": {
        "id": {
          "type": "string"
        },
        "type": {
          "type": "string"
        },
        "attributes": {
          "type": "object",
          "properties": {
            "accession": {
              "type": "string"
            },
            "bioproject": {
              "type": [
                "string",
                "null"
              ]
            },
            "is-private": {
              "type": [
                "boolean",
                "null"
              ]
            },
            "study-name": {
              "type": [
                "string",
                "null"
              ]
            },
            "centre-name": {
              "type": [
                "string",
                "null"
              ]
            },
            "last-update": {
              "type": [
                "string",
                "null"
              ]
            },
            "samples-count": {
              "type": [
                "integer",
                "null"
              ]
            },
            "study-abstract": {
              "type": [
                "string",
                "null"
              ],
              "description": "null when the study has no abstract."
            },
            "data-origination": {
              "type": [
                "string",
                "null"
              ]
            },
            "public-release-date": {
              "type": [
                "string",
                "null"
              ]
            },
            "secondary-accession": {
              "type": [
                "string",
                "null"
              ]
            }
          },
          "additionalProperties": true
        },
        "relationships": {
          "type": "object",
          "additionalProperties": true
        }
      },
      "additionalProperties": true
    }
  },
  "additionalProperties": true
}